Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cspg4Q8VHY0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Gm5643-201ENSMUST00000117081 966 ntBASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.84■□□□□ 0.29
Cspg4Q8VHY0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cspg4Q8VHY0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg4Q8VHY0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Cspg4Q8VHY0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg4Q8VHY0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg4Q8VHY0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg4Q8VHY0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg4Q8VHY0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cspg4Q8VHY0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cspg4Q8VHY0 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cspg4Q8VHY0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cspg4Q8VHY0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Gm38205-201ENSMUST00000192243 258 ntBASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Gm7367-201ENSMUST00000057611 492 ntBASIC16.79■□□□□ 0.28
Cspg4Q8VHY0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Gm37055-201ENSMUST00000191866 133 ntBASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cspg4Q8VHY0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms