Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Gm7291-201ENSMUST00000199147 382 ntBASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3kbp1Q8R550 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3kbp1Q8R550 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3kbp1Q8R550 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Gm42569-201ENSMUST00000200539 472 ntBASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Gm42642-201ENSMUST00000200683 355 ntBASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3kbp1Q8R550 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sh3kbp1Q8R550 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Sh3kbp1Q8R550 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.02■□□□□ 0.79
Sh3kbp1Q8R550 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3kbp1Q8R550 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3kbp1Q8R550 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3kbp1Q8R550 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3kbp1Q8R550 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.99■□□□□ 0.79
Sh3kbp1Q8R550 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3kbp1Q8R550 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.99■□□□□ 0.79
Sh3kbp1Q8R550 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sh3kbp1Q8R550 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3kbp1Q8R550 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3kbp1Q8R550 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3kbp1Q8R550 Gm27405-201ENSMUST00000184201 112 ntBASIC19.98■□□□□ 0.79
Sh3kbp1Q8R550 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3kbp1Q8R550 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3kbp1Q8R550 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sh3kbp1Q8R550 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.97■□□□□ 0.79
Sh3kbp1Q8R550 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms