Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slf1Q8R3P9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slf1Q8R3P9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slf1Q8R3P9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slf1Q8R3P9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.61■□□□□ 0.73
Slf1Q8R3P9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.61■□□□□ 0.73
Slf1Q8R3P9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slf1Q8R3P9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slf1Q8R3P9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slf1Q8R3P9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slf1Q8R3P9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slf1Q8R3P9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Slf1Q8R3P9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slf1Q8R3P9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.58■□□□□ 0.73
Slf1Q8R3P9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Gm10232-201ENSMUST00000089221 720 ntBASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slf1Q8R3P9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slf1Q8R3P9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slf1Q8R3P9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slf1Q8R3P9 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slf1Q8R3P9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms