Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tm6sf2Q8R1J1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tm6sf2Q8R1J1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tm6sf2Q8R1J1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tm6sf2Q8R1J1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tm6sf2Q8R1J1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.29■□□□□ 0.52
Tm6sf2Q8R1J1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tm6sf2Q8R1J1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Gm5874-201ENSMUST00000096101 508 ntBASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tm6sf2Q8R1J1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tm6sf2Q8R1J1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tm6sf2Q8R1J1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tm6sf2Q8R1J1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Gm8495-201ENSMUST00000188740 694 ntBASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tm6sf2Q8R1J1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Gm27801-201ENSMUST00000184174 223 ntBASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tm6sf2Q8R1J1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Gm10493-201ENSMUST00000097270 612 ntBASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tm6sf2Q8R1J1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tm6sf2Q8R1J1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tm6sf2Q8R1J1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tm6sf2Q8R1J1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms