Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CipcQ8R0W1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CipcQ8R0W1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CipcQ8R0W1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CipcQ8R0W1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CipcQ8R0W1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CipcQ8R0W1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CipcQ8R0W1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.35■□□□□ 0.53
CipcQ8R0W1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Smad6-203ENSMUST00000179458 273 ntBASIC18.34■□□□□ 0.53
CipcQ8R0W1 Gm43060-201ENSMUST00000200621 289 ntBASIC18.34■□□□□ 0.53
CipcQ8R0W1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CipcQ8R0W1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CipcQ8R0W1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CipcQ8R0W1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CipcQ8R0W1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CipcQ8R0W1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CipcQ8R0W1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CipcQ8R0W1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CipcQ8R0W1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CipcQ8R0W1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CipcQ8R0W1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.33■□□□□ 0.52
CipcQ8R0W1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CipcQ8R0W1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
CipcQ8R0W1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CipcQ8R0W1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CipcQ8R0W1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CipcQ8R0W1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CipcQ8R0W1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CipcQ8R0W1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CipcQ8R0W1 Gm11421-201ENSMUST00000122124 294 ntBASIC18.3■□□□□ 0.52
CipcQ8R0W1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CipcQ8R0W1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CipcQ8R0W1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CipcQ8R0W1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CipcQ8R0W1 Golph3-202ENSMUST00000226517 2359 ntBASIC18.3■□□□□ 0.52
CipcQ8R0W1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CipcQ8R0W1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CipcQ8R0W1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.29■□□□□ 0.52
CipcQ8R0W1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CipcQ8R0W1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CipcQ8R0W1 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.28■□□□□ 0.52
CipcQ8R0W1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CipcQ8R0W1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CipcQ8R0W1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms