Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Rfwd3Q8CIK8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rfwd3Q8CIK8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Rfwd3Q8CIK8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfwd3Q8CIK8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.21■□□□□ 0.51
Rfwd3Q8CIK8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.21■□□□□ 0.5
Rfwd3Q8CIK8 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.2■□□□□ 0.5
Rfwd3Q8CIK8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rfwd3Q8CIK8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.2■□□□□ 0.5
Rfwd3Q8CIK8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rfwd3Q8CIK8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfwd3Q8CIK8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rfwd3Q8CIK8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfwd3Q8CIK8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rfwd3Q8CIK8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Smad6-203ENSMUST00000179458 273 ntBASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Gm43017-201ENSMUST00000198296 752 ntBASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rfwd3Q8CIK8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.18■□□□□ 0.5
Rfwd3Q8CIK8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd3Q8CIK8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rfwd3Q8CIK8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms