Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm1bQ8CIG3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm1bQ8CIG3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 Gm12251-201ENSMUST00000117893 792 ntBASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 Spcs1-204ENSMUST00000226782 949 ntBASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm1bQ8CIG3 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm1bQ8CIG3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Kdm1bQ8CIG3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Kdm1bQ8CIG3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm1bQ8CIG3 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm1bQ8CIG3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm1bQ8CIG3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm1bQ8CIG3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms