Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uba3Q8C878 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
Uba3Q8C878 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Uba3Q8C878 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uba3Q8C878 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uba3Q8C878 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Uba3Q8C878 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uba3Q8C878 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uba3Q8C878 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uba3Q8C878 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uba3Q8C878 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Uba3Q8C878 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.53■□□□□ 0.88
Uba3Q8C878 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Uba3Q8C878 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uba3Q8C878 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Uba3Q8C878 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uba3Q8C878 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.52■□□□□ 0.88
Uba3Q8C878 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.52■□□□□ 0.88
Uba3Q8C878 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.52■□□□□ 0.88
Uba3Q8C878 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uba3Q8C878 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uba3Q8C878 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Uba3Q8C878 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Uba3Q8C878 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Uba3Q8C878 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Uba3Q8C878 Gm11421-201ENSMUST00000122124 294 ntBASIC20.51■□□□□ 0.87
Uba3Q8C878 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Uba3Q8C878 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uba3Q8C878 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.51■□□□□ 0.87
Uba3Q8C878 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.51■□□□□ 0.87
Uba3Q8C878 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Uba3Q8C878 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.51■□□□□ 0.87
Uba3Q8C878 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.51■□□□□ 0.87
Uba3Q8C878 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Uba3Q8C878 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Uba3Q8C878 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Uba3Q8C878 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uba3Q8C878 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uba3Q8C878 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uba3Q8C878 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Uba3Q8C878 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.5■□□□□ 0.87
Uba3Q8C878 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uba3Q8C878 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Uba3Q8C878 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Uba3Q8C878 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uba3Q8C878 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Uba3Q8C878 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Uba3Q8C878 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uba3Q8C878 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uba3Q8C878 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Uba3Q8C878 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Uba3Q8C878 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Uba3Q8C878 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uba3Q8C878 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.48■□□□□ 0.87
Uba3Q8C878 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Uba3Q8C878 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uba3Q8C878 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.48■□□□□ 0.87
Uba3Q8C878 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Uba3Q8C878 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.47■□□□□ 0.87
Uba3Q8C878 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uba3Q8C878 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uba3Q8C878 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.47■□□□□ 0.87
Uba3Q8C878 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.47■□□□□ 0.87
Uba3Q8C878 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uba3Q8C878 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uba3Q8C878 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uba3Q8C878 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Uba3Q8C878 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Uba3Q8C878 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.46■□□□□ 0.87
Uba3Q8C878 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uba3Q8C878 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Uba3Q8C878 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.46■□□□□ 0.87
Uba3Q8C878 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uba3Q8C878 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uba3Q8C878 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uba3Q8C878 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uba3Q8C878 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uba3Q8C878 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Uba3Q8C878 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Uba3Q8C878 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.45■□□□□ 0.87
Uba3Q8C878 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Uba3Q8C878 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Uba3Q8C878 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Uba3Q8C878 Gm15039-201ENSMUST00000118914 875 ntBASIC20.45■□□□□ 0.86
Uba3Q8C878 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.45■□□□□ 0.86
Uba3Q8C878 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Uba3Q8C878 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Uba3Q8C878 Gm43060-201ENSMUST00000200621 289 ntBASIC20.45■□□□□ 0.86
Uba3Q8C878 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Uba3Q8C878 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms