Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ccdc60Q8C4J0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ccdc60Q8C4J0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ccdc60Q8C4J0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ccdc60Q8C4J0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ccdc60Q8C4J0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ccdc60Q8C4J0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.89■■□□□ 1.58
Ccdc60Q8C4J0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC24.89■■□□□ 1.58
Ccdc60Q8C4J0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ccdc60Q8C4J0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
Ccdc60Q8C4J0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ccdc60Q8C4J0 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.89■■□□□ 1.57
Ccdc60Q8C4J0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ccdc60Q8C4J0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Ccdc60Q8C4J0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
Ccdc60Q8C4J0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ccdc60Q8C4J0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
Ccdc60Q8C4J0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ccdc60Q8C4J0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ccdc60Q8C4J0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Ccdc60Q8C4J0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC24.87■■□□□ 1.57
Ccdc60Q8C4J0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ccdc60Q8C4J0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ccdc60Q8C4J0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ccdc60Q8C4J0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC24.87■■□□□ 1.57
Ccdc60Q8C4J0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC24.86■■□□□ 1.57
Ccdc60Q8C4J0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Ccdc60Q8C4J0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ccdc60Q8C4J0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ccdc60Q8C4J0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ccdc60Q8C4J0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC24.86■■□□□ 1.57
Ccdc60Q8C4J0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Ccdc60Q8C4J0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ccdc60Q8C4J0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ccdc60Q8C4J0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ccdc60Q8C4J0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.84■■□□□ 1.57
Ccdc60Q8C4J0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC24.84■■□□□ 1.57
Ccdc60Q8C4J0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.84■■□□□ 1.57
Ccdc60Q8C4J0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ccdc60Q8C4J0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Ccdc60Q8C4J0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ccdc60Q8C4J0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ccdc60Q8C4J0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ccdc60Q8C4J0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Ccdc60Q8C4J0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ccdc60Q8C4J0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Ccdc60Q8C4J0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc60Q8C4J0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc60Q8C4J0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc60Q8C4J0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc60Q8C4J0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc60Q8C4J0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc60Q8C4J0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Ccdc60Q8C4J0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Gm43060-201ENSMUST00000200621 289 ntBASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Ccdc60Q8C4J0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Ccdc60Q8C4J0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ccdc60Q8C4J0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC24.8■■□□□ 1.56
Ccdc60Q8C4J0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ccdc60Q8C4J0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Ccdc60Q8C4J0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC24.8■■□□□ 1.56
Ccdc60Q8C4J0 Notumos-201ENSMUST00000151998 2659 ntBASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ccdc60Q8C4J0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Ccdc60Q8C4J0 Golph3-202ENSMUST00000226517 2359 ntBASIC24.78■■□□□ 1.56
Ccdc60Q8C4J0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Ccdc60Q8C4J0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms