Protein–RNA interactions for Protein: Q8BUE1

Slc9a4, Sodium/hydrogen exchanger 4, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a4Q8BUE1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc9a4Q8BUE1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc9a4Q8BUE1 Gm40848-201ENSMUST00000221998 324 ntBASIC20.4■□□□□ 0.86
Slc9a4Q8BUE1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc9a4Q8BUE1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc9a4Q8BUE1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.39■□□□□ 0.85
Slc9a4Q8BUE1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc9a4Q8BUE1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Slc9a4Q8BUE1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc9a4Q8BUE1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc9a4Q8BUE1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc9a4Q8BUE1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc9a4Q8BUE1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc9a4Q8BUE1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.38■□□□□ 0.85
Slc9a4Q8BUE1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slc9a4Q8BUE1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc9a4Q8BUE1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Slc9a4Q8BUE1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.38■□□□□ 0.85
Slc9a4Q8BUE1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc9a4Q8BUE1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.36■□□□□ 0.85
Slc9a4Q8BUE1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Slc9a4Q8BUE1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc9a4Q8BUE1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Slc9a4Q8BUE1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc9a4Q8BUE1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc9a4Q8BUE1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.33■□□□□ 0.85
Slc9a4Q8BUE1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Slc9a4Q8BUE1 Gm43060-201ENSMUST00000200621 289 ntBASIC20.33■□□□□ 0.85
Slc9a4Q8BUE1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.33■□□□□ 0.85
Slc9a4Q8BUE1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Slc9a4Q8BUE1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc9a4Q8BUE1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.31■□□□□ 0.84
Slc9a4Q8BUE1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Slc9a4Q8BUE1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc9a4Q8BUE1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc9a4Q8BUE1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms