Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup54Q8BTS4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nup54Q8BTS4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20■□□□□ 0.79
Nup54Q8BTS4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
Nup54Q8BTS4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.99■□□□□ 0.79
Nup54Q8BTS4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.99■□□□□ 0.79
Nup54Q8BTS4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup54Q8BTS4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup54Q8BTS4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup54Q8BTS4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup54Q8BTS4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup54Q8BTS4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup54Q8BTS4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup54Q8BTS4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nup54Q8BTS4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup54Q8BTS4 Gm18284-201ENSMUST00000172604 624 ntBASIC19.98■□□□□ 0.79
Nup54Q8BTS4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Nup54Q8BTS4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup54Q8BTS4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup54Q8BTS4 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup54Q8BTS4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup54Q8BTS4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup54Q8BTS4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup54Q8BTS4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup54Q8BTS4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nup54Q8BTS4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup54Q8BTS4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.96■□□□□ 0.79
Nup54Q8BTS4 Gm10493-201ENSMUST00000097270 612 ntBASIC19.96■□□□□ 0.79
Nup54Q8BTS4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup54Q8BTS4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.96■□□□□ 0.79
Nup54Q8BTS4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup54Q8BTS4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup54Q8BTS4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nup54Q8BTS4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nup54Q8BTS4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup54Q8BTS4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup54Q8BTS4 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.95■□□□□ 0.78
Nup54Q8BTS4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup54Q8BTS4 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.95■□□□□ 0.78
Nup54Q8BTS4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup54Q8BTS4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup54Q8BTS4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup54Q8BTS4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup54Q8BTS4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nup54Q8BTS4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.94■□□□□ 0.78
Nup54Q8BTS4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Nup54Q8BTS4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nup54Q8BTS4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Gm8495-201ENSMUST00000188740 694 ntBASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nup54Q8BTS4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 Gm5874-201ENSMUST00000096101 508 ntBASIC19.91■□□□□ 0.78
Nup54Q8BTS4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nup54Q8BTS4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup54Q8BTS4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nup54Q8BTS4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup54Q8BTS4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nup54Q8BTS4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.9■□□□□ 0.78
Nup54Q8BTS4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nup54Q8BTS4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms