Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pum3Q8BKS9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pum3Q8BKS9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pum3Q8BKS9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.6■□□□□ 0.89
Pum3Q8BKS9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pum3Q8BKS9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pum3Q8BKS9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.6■□□□□ 0.89
Pum3Q8BKS9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pum3Q8BKS9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pum3Q8BKS9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pum3Q8BKS9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.59■□□□□ 0.89
Pum3Q8BKS9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pum3Q8BKS9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pum3Q8BKS9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pum3Q8BKS9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pum3Q8BKS9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pum3Q8BKS9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pum3Q8BKS9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pum3Q8BKS9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pum3Q8BKS9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pum3Q8BKS9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pum3Q8BKS9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.58■□□□□ 0.89
Pum3Q8BKS9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pum3Q8BKS9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pum3Q8BKS9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pum3Q8BKS9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pum3Q8BKS9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pum3Q8BKS9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pum3Q8BKS9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pum3Q8BKS9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.56■□□□□ 0.88
Pum3Q8BKS9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pum3Q8BKS9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pum3Q8BKS9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pum3Q8BKS9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pum3Q8BKS9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pum3Q8BKS9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pum3Q8BKS9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Gm27801-201ENSMUST00000184174 223 ntBASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pum3Q8BKS9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pum3Q8BKS9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pum3Q8BKS9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pum3Q8BKS9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Pum3Q8BKS9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.53■□□□□ 0.88
Pum3Q8BKS9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pum3Q8BKS9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms