Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Srrm4Q8BKA3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Srrm4Q8BKA3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Srrm4Q8BKA3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
Srrm4Q8BKA3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Srrm4Q8BKA3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Smad6-203ENSMUST00000179458 273 ntBASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Srrm4Q8BKA3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Srrm4Q8BKA3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Srrm4Q8BKA3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm4Q8BKA3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms