Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tdp1Q8BJ37 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Gm13534-201ENSMUST00000121169 513 ntBASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tdp1Q8BJ37 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 Nespas-201ENSMUST00000143738 1083 ntBASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tdp1Q8BJ37 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tdp1Q8BJ37 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tdp1Q8BJ37 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Gm7290-201ENSMUST00000104990 617 ntBASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Gm12918-201ENSMUST00000120234 636 ntBASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Gm15710-201ENSMUST00000121821 636 ntBASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Gm5075-201ENSMUST00000196916 622 ntBASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.56■■□□□ 1.04
Tdp1Q8BJ37 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Tdp1Q8BJ37 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tdp1Q8BJ37 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tdp1Q8BJ37 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.54■■□□□ 1.04
Tdp1Q8BJ37 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Tdp1Q8BJ37 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Tdp1Q8BJ37 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.54■■□□□ 1.04
Tdp1Q8BJ37 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tdp1Q8BJ37 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.54■■□□□ 1.04
Tdp1Q8BJ37 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 Gm12527-201ENSMUST00000117967 564 ntBASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tdp1Q8BJ37 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tdp1Q8BJ37 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tdp1Q8BJ37 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tdp1Q8BJ37 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.52■■□□□ 1.04
Tdp1Q8BJ37 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tdp1Q8BJ37 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tdp1Q8BJ37 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.52■■□□□ 1.04
Tdp1Q8BJ37 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Gm5408-201ENSMUST00000197998 747 ntBASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.51■■□□□ 1.03
Tdp1Q8BJ37 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tdp1Q8BJ37 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.5■■□□□ 1.03
Tdp1Q8BJ37 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.5■■□□□ 1.03
Tdp1Q8BJ37 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms