Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc5a7Q8BGY9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc5a7Q8BGY9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc5a7Q8BGY9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc5a7Q8BGY9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc5a7Q8BGY9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Slc5a7Q8BGY9 Gm5540-201ENSMUST00000131852 1848 ntBASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Slc5a7Q8BGY9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slc5a7Q8BGY9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Slc5a7Q8BGY9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Mir6236-201ENSMUST00000184437 123 ntBASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms