Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim23Q8BGX0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Gm18284-201ENSMUST00000172604 624 ntBASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim23Q8BGX0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim23Q8BGX0 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim23Q8BGX0 Gm27801-201ENSMUST00000184174 223 ntBASIC18.8■□□□□ 0.6
Trim23Q8BGX0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim23Q8BGX0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim23Q8BGX0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim23Q8BGX0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.79■□□□□ 0.6
Trim23Q8BGX0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Gm10493-201ENSMUST00000097270 612 ntBASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim23Q8BGX0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim23Q8BGX0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Gm8495-201ENSMUST00000188740 694 ntBASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim23Q8BGX0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Trim23Q8BGX0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.74■□□□□ 0.59
Trim23Q8BGX0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim23Q8BGX0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim23Q8BGX0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim23Q8BGX0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim23Q8BGX0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim23Q8BGX0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim23Q8BGX0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim23Q8BGX0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Trim23Q8BGX0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim23Q8BGX0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms