Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh8Q7TSK3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.18■□□□□ 0.66
Pcdh8Q7TSK3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh8Q7TSK3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh8Q7TSK3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdh8Q7TSK3 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh8Q7TSK3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdh8Q7TSK3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh8Q7TSK3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdh8Q7TSK3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh8Q7TSK3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Gm10849-201ENSMUST00000100397 618 ntBASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 AV356131-201ENSMUST00000206201 750 ntBASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdh8Q7TSK3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Gm10033-202ENSMUST00000211874 928 ntBASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdh8Q7TSK3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh8Q7TSK3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.13■□□□□ 0.65
Pcdh8Q7TSK3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Gm27801-201ENSMUST00000184174 223 ntBASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh8Q7TSK3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh8Q7TSK3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh8Q7TSK3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms