Protein–RNA interactions for Protein: Q6ZQM0

Rffl, E3 ubiquitin-protein ligase rififylin, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RfflQ6ZQM0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RfflQ6ZQM0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RfflQ6ZQM0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RfflQ6ZQM0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RfflQ6ZQM0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RfflQ6ZQM0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RfflQ6ZQM0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RfflQ6ZQM0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RfflQ6ZQM0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RfflQ6ZQM0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RfflQ6ZQM0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RfflQ6ZQM0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RfflQ6ZQM0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.83■□□□□ 0.6
RfflQ6ZQM0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.83■□□□□ 0.6
RfflQ6ZQM0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RfflQ6ZQM0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RfflQ6ZQM0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RfflQ6ZQM0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RfflQ6ZQM0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.83■□□□□ 0.6
RfflQ6ZQM0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RfflQ6ZQM0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RfflQ6ZQM0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Mir6236-201ENSMUST00000184437 123 ntBASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RfflQ6ZQM0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RfflQ6ZQM0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.78■□□□□ 0.6
RfflQ6ZQM0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms