Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.67■□□□□ 0.74
Casc4Q6P2L7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Casc4Q6P2L7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Casc4Q6P2L7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Casc4Q6P2L7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc4Q6P2L7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casc4Q6P2L7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.65■□□□□ 0.74
Casc4Q6P2L7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Casc4Q6P2L7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Casc4Q6P2L7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Casc4Q6P2L7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Casc4Q6P2L7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.64■□□□□ 0.73
Casc4Q6P2L7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc4Q6P2L7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.64■□□□□ 0.73
Casc4Q6P2L7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Casc4Q6P2L7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Casc4Q6P2L7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc4Q6P2L7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Casc4Q6P2L7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc4Q6P2L7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc4Q6P2L7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc4Q6P2L7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc4Q6P2L7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Casc4Q6P2L7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Casc4Q6P2L7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Casc4Q6P2L7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Casc4Q6P2L7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Serp2-204ENSMUST00000228055 705 ntBASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Casc4Q6P2L7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Gm15039-201ENSMUST00000118914 875 ntBASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Casc4Q6P2L7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Casc4Q6P2L7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Casc4Q6P2L7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casc4Q6P2L7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.58■□□□□ 0.73
Casc4Q6P2L7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Casc4Q6P2L7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Casc4Q6P2L7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc4Q6P2L7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Casc4Q6P2L7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Casc4Q6P2L7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Casc4Q6P2L7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.58■□□□□ 0.72
Casc4Q6P2L7 Gm40848-201ENSMUST00000221998 324 ntBASIC19.58■□□□□ 0.72
Casc4Q6P2L7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms