Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Rps24-207ENSMUST00000224568 714 ntBASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scube1Q6NZL8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.65■□□□□ 0.58
Scube1Q6NZL8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scube1Q6NZL8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scube1Q6NZL8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scube1Q6NZL8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Scube1Q6NZL8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scube1Q6NZL8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Scube1Q6NZL8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube1Q6NZL8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube1Q6NZL8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube1Q6NZL8 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.64■□□□□ 0.57
Scube1Q6NZL8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube1Q6NZL8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.64■□□□□ 0.57
Scube1Q6NZL8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scube1Q6NZL8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scube1Q6NZL8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scube1Q6NZL8 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.61■□□□□ 0.57
Scube1Q6NZL8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scube1Q6NZL8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scube1Q6NZL8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Gm9959-201ENSMUST00000068277 390 ntBASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.59■□□□□ 0.57
Scube1Q6NZL8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms