Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sp140Q6NSQ5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sp140Q6NSQ5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sp140Q6NSQ5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sp140Q6NSQ5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sp140Q6NSQ5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Sp140Q6NSQ5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Sp140Q6NSQ5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
Sp140Q6NSQ5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.72■□□□□ 0.75
Sp140Q6NSQ5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Sp140Q6NSQ5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sp140Q6NSQ5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sp140Q6NSQ5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sp140Q6NSQ5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sp140Q6NSQ5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sp140Q6NSQ5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Sp140Q6NSQ5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sp140Q6NSQ5 Gm43137-201ENSMUST00000198052 594 ntBASIC19.71■□□□□ 0.75
Sp140Q6NSQ5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sp140Q6NSQ5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sp140Q6NSQ5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sp140Q6NSQ5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sp140Q6NSQ5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sp140Q6NSQ5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sp140Q6NSQ5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Gm12251-201ENSMUST00000117893 792 ntBASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Serp2-204ENSMUST00000228055 705 ntBASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Gm13241-201ENSMUST00000094493 780 ntBASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sp140Q6NSQ5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sp140Q6NSQ5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Spcs1-204ENSMUST00000226782 949 ntBASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sp140Q6NSQ5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sp140Q6NSQ5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sp140Q6NSQ5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms