Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Rpa2Q62193 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.84■□□□□ 0.45
Rpa2Q62193 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Rpa2Q62193 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rpa2Q62193 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.84■□□□□ 0.45
Rpa2Q62193 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.84■□□□□ 0.45
Rpa2Q62193 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rpa2Q62193 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa2Q62193 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa2Q62193 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa2Q62193 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa2Q62193 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa2Q62193 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rpa2Q62193 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa2Q62193 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rpa2Q62193 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.83■□□□□ 0.44
Rpa2Q62193 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rpa2Q62193 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.82■□□□□ 0.44
Rpa2Q62193 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rpa2Q62193 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Rpa2Q62193 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpa2Q62193 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.82■□□□□ 0.44
Rpa2Q62193 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpa2Q62193 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpa2Q62193 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpa2Q62193 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rpa2Q62193 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.81■□□□□ 0.44
Rpa2Q62193 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.81■□□□□ 0.44
Rpa2Q62193 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rpa2Q62193 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpa2Q62193 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpa2Q62193 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Rpa2Q62193 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.8■□□□□ 0.44
Rpa2Q62193 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.8■□□□□ 0.44
Rpa2Q62193 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Rpa2Q62193 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpa2Q62193 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rpa2Q62193 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Gm40848-201ENSMUST00000221998 324 ntBASIC17.79■□□□□ 0.44
Rpa2Q62193 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.79■□□□□ 0.44
Rpa2Q62193 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rpa2Q62193 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rpa2Q62193 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rpa2Q62193 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.79■□□□□ 0.44
Rpa2Q62193 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpa2Q62193 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Rpa2Q62193 AA386476-201ENSMUST00000098781 1665 ntBASIC17.78■□□□□ 0.44
Rpa2Q62193 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.78■□□□□ 0.44
Rpa2Q62193 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpa2Q62193 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms