Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Gm12933-201ENSMUST00000120203 872 ntBASIC22.54■■□□□ 1.2
Scnn1aQ61180 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Scnn1aQ61180 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Scnn1aQ61180 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.53■■□□□ 1.2
Scnn1aQ61180 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Scnn1aQ61180 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Scnn1aQ61180 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Scnn1aQ61180 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.52■■□□□ 1.2
Scnn1aQ61180 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scnn1aQ61180 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Scnn1aQ61180 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.52■■□□□ 1.2
Scnn1aQ61180 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Scnn1aQ61180 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Scnn1aQ61180 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Scnn1aQ61180 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.51■■□□□ 1.19
Scnn1aQ61180 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Scnn1aQ61180 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scnn1aQ61180 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Scnn1aQ61180 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Scnn1aQ61180 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.5■■□□□ 1.19
Scnn1aQ61180 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Scnn1aQ61180 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.49■■□□□ 1.19
Scnn1aQ61180 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scnn1aQ61180 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Scnn1aQ61180 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Scnn1aQ61180 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scnn1aQ61180 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Scnn1aQ61180 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scnn1aQ61180 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scnn1aQ61180 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Scnn1aQ61180 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.48■■□□□ 1.19
Scnn1aQ61180 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Scnn1aQ61180 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Scnn1aQ61180 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Scnn1aQ61180 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.48■■□□□ 1.19
Scnn1aQ61180 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scnn1aQ61180 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Scnn1aQ61180 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scnn1aQ61180 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Scnn1aQ61180 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.47■■□□□ 1.19
Scnn1aQ61180 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scnn1aQ61180 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
Scnn1aQ61180 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scnn1aQ61180 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Scnn1aQ61180 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scnn1aQ61180 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scnn1aQ61180 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scnn1aQ61180 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.46■■□□□ 1.19
Scnn1aQ61180 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Scnn1aQ61180 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.45■■□□□ 1.18
Scnn1aQ61180 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Scnn1aQ61180 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC22.45■■□□□ 1.18
Scnn1aQ61180 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scnn1aQ61180 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scnn1aQ61180 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scnn1aQ61180 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Scnn1aQ61180 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Scnn1aQ61180 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scnn1aQ61180 Gm13534-201ENSMUST00000121169 513 ntBASIC22.44■■□□□ 1.18
Scnn1aQ61180 Gm7860-201ENSMUST00000121190 879 ntBASIC22.44■■□□□ 1.18
Scnn1aQ61180 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scnn1aQ61180 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scnn1aQ61180 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC22.43■■□□□ 1.18
Scnn1aQ61180 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.43■■□□□ 1.18
Scnn1aQ61180 Gm10602-201ENSMUST00000098239 609 ntBASIC22.43■■□□□ 1.18
Scnn1aQ61180 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scnn1aQ61180 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Scnn1aQ61180 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Scnn1aQ61180 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scnn1aQ61180 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.42■■□□□ 1.18
Scnn1aQ61180 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Scnn1aQ61180 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scnn1aQ61180 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Scnn1aQ61180 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms