Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.74■□□□□ 0.75
Sdf4Q61112 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sdf4Q61112 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Sdf4Q61112 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdf4Q61112 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.73■□□□□ 0.75
Sdf4Q61112 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdf4Q61112 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sdf4Q61112 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.73■□□□□ 0.75
Sdf4Q61112 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdf4Q61112 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.73■□□□□ 0.75
Sdf4Q61112 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdf4Q61112 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdf4Q61112 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdf4Q61112 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Sdf4Q61112 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sdf4Q61112 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdf4Q61112 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdf4Q61112 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sdf4Q61112 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdf4Q61112 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.71■□□□□ 0.75
Sdf4Q61112 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sdf4Q61112 Gm43173-201ENSMUST00000202246 593 ntBASIC19.71■□□□□ 0.75
Sdf4Q61112 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.71■□□□□ 0.75
Sdf4Q61112 Gm6139-201ENSMUST00000079261 882 ntBASIC19.71■□□□□ 0.75
Sdf4Q61112 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdf4Q61112 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdf4Q61112 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sdf4Q61112 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdf4Q61112 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sdf4Q61112 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdf4Q61112 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdf4Q61112 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sdf4Q61112 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdf4Q61112 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sdf4Q61112 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sdf4Q61112 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Sdf4Q61112 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.69■□□□□ 0.74
Sdf4Q61112 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sdf4Q61112 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdf4Q61112 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sdf4Q61112 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Sdf4Q61112 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdf4Q61112 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdf4Q61112 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Sdf4Q61112 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Sdf4Q61112 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.68■□□□□ 0.74
Sdf4Q61112 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdf4Q61112 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Sdf4Q61112 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sdf4Q61112 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdf4Q61112 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sdf4Q61112 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sdf4Q61112 Serp2-204ENSMUST00000228055 705 ntBASIC19.67■□□□□ 0.74
Sdf4Q61112 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdf4Q61112 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdf4Q61112 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdf4Q61112 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sdf4Q61112 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.67■□□□□ 0.74
Sdf4Q61112 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Sdf4Q61112 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sdf4Q61112 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.66■□□□□ 0.74
Sdf4Q61112 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdf4Q61112 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdf4Q61112 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdf4Q61112 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdf4Q61112 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sdf4Q61112 Smad6-203ENSMUST00000179458 273 ntBASIC19.66■□□□□ 0.74
Sdf4Q61112 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdf4Q61112 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdf4Q61112 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.66■□□□□ 0.74
Sdf4Q61112 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sdf4Q61112 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Sdf4Q61112 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sdf4Q61112 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdf4Q61112 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Sdf4Q61112 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdf4Q61112 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sdf4Q61112 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdf4Q61112 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdf4Q61112 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sdf4Q61112 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms