Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scarb1Q61009 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Scarb1Q61009 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Scarb1Q61009 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.35■□□□□ 0.21
Scarb1Q61009 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scarb1Q61009 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Scarb1Q61009 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.34■□□□□ 0.21
Scarb1Q61009 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scarb1Q61009 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scarb1Q61009 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Scarb1Q61009 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.34■□□□□ 0.21
Scarb1Q61009 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Scarb1Q61009 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Scarb1Q61009 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scarb1Q61009 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scarb1Q61009 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scarb1Q61009 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Scarb1Q61009 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarb1Q61009 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarb1Q61009 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarb1Q61009 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarb1Q61009 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Scarb1Q61009 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarb1Q61009 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Scarb1Q61009 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scarb1Q61009 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.33■□□□□ 0.2
Scarb1Q61009 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scarb1Q61009 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarb1Q61009 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Scarb1Q61009 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarb1Q61009 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scarb1Q61009 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarb1Q61009 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Scarb1Q61009 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarb1Q61009 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.32■□□□□ 0.2
Scarb1Q61009 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.32■□□□□ 0.2
Scarb1Q61009 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Scarb1Q61009 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.32■□□□□ 0.2
Scarb1Q61009 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarb1Q61009 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarb1Q61009 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarb1Q61009 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.32■□□□□ 0.2
Scarb1Q61009 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scarb1Q61009 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scarb1Q61009 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.31■□□□□ 0.2
Scarb1Q61009 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scarb1Q61009 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarb1Q61009 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarb1Q61009 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scarb1Q61009 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarb1Q61009 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarb1Q61009 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.3■□□□□ 0.2
Scarb1Q61009 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarb1Q61009 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarb1Q61009 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.3■□□□□ 0.2
Scarb1Q61009 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarb1Q61009 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Scarb1Q61009 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scarb1Q61009 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarb1Q61009 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarb1Q61009 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scarb1Q61009 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarb1Q61009 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms