Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfaip3Q60769 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.28■□□□□ 0.52
Tnfaip3Q60769 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfaip3Q60769 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.28■□□□□ 0.52
Tnfaip3Q60769 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.28■□□□□ 0.52
Tnfaip3Q60769 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfaip3Q60769 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tnfaip3Q60769 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfaip3Q60769 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfaip3Q60769 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Tnfaip3Q60769 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.27■□□□□ 0.52
Tnfaip3Q60769 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfaip3Q60769 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfaip3Q60769 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfaip3Q60769 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfaip3Q60769 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.27■□□□□ 0.51
Tnfaip3Q60769 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfaip3Q60769 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfaip3Q60769 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 AA386476-201ENSMUST00000098781 1665 ntBASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Gm27801-201ENSMUST00000184174 223 ntBASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfaip3Q60769 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip3Q60769 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip3Q60769 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip3Q60769 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip3Q60769 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfaip3Q60769 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip3Q60769 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip3Q60769 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip3Q60769 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip3Q60769 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfaip3Q60769 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.23■□□□□ 0.51
Tnfaip3Q60769 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.23■□□□□ 0.51
Tnfaip3Q60769 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.23■□□□□ 0.51
Tnfaip3Q60769 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfaip3Q60769 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Golph3-202ENSMUST00000226517 2359 ntBASIC18.23■□□□□ 0.51
Tnfaip3Q60769 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfaip3Q60769 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfaip3Q60769 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Tnfaip3Q60769 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Tnfaip3Q60769 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tnfaip3Q60769 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip3Q60769 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.2■□□□□ 0.5
Tnfaip3Q60769 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfaip3Q60769 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tnfaip3Q60769 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
Tnfaip3Q60769 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms