Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim40Q3UWA4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim40Q3UWA4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim40Q3UWA4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim40Q3UWA4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim40Q3UWA4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim40Q3UWA4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim40Q3UWA4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim40Q3UWA4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim40Q3UWA4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim40Q3UWA4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Rarb-207ENSMUST00000225921 2756 ntBASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim40Q3UWA4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim40Q3UWA4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim40Q3UWA4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim40Q3UWA4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim40Q3UWA4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms