Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Limch1Q3UH68 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.91■■□□□ 1.26
Limch1Q3UH68 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Limch1Q3UH68 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Gm5874-201ENSMUST00000096101 508 ntBASIC22.9■■□□□ 1.26
Limch1Q3UH68 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Limch1Q3UH68 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Limch1Q3UH68 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Limch1Q3UH68 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Limch1Q3UH68 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.89■■□□□ 1.26
Limch1Q3UH68 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Limch1Q3UH68 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Limch1Q3UH68 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Limch1Q3UH68 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Limch1Q3UH68 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Limch1Q3UH68 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Limch1Q3UH68 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Limch1Q3UH68 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Limch1Q3UH68 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Limch1Q3UH68 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Limch1Q3UH68 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
Limch1Q3UH68 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Limch1Q3UH68 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
Limch1Q3UH68 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Limch1Q3UH68 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Limch1Q3UH68 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Limch1Q3UH68 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Limch1Q3UH68 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
Limch1Q3UH68 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Limch1Q3UH68 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Limch1Q3UH68 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Limch1Q3UH68 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Limch1Q3UH68 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Limch1Q3UH68 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Limch1Q3UH68 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Limch1Q3UH68 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Limch1Q3UH68 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Limch1Q3UH68 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Limch1Q3UH68 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Limch1Q3UH68 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.84■■□□□ 1.25
Limch1Q3UH68 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.84■■□□□ 1.25
Limch1Q3UH68 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.84■■□□□ 1.25
Limch1Q3UH68 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Limch1Q3UH68 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Limch1Q3UH68 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Limch1Q3UH68 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Limch1Q3UH68 Hsf1-204ENSMUST00000226872 2104 ntBASIC22.84■■□□□ 1.25
Limch1Q3UH68 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.83■■□□□ 1.25
Limch1Q3UH68 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Limch1Q3UH68 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Limch1Q3UH68 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Limch1Q3UH68 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Limch1Q3UH68 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Limch1Q3UH68 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Limch1Q3UH68 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Limch1Q3UH68 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Limch1Q3UH68 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Limch1Q3UH68 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Limch1Q3UH68 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.82■■□□□ 1.24
Limch1Q3UH68 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Limch1Q3UH68 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Limch1Q3UH68 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC22.81■■□□□ 1.24
Limch1Q3UH68 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.81■■□□□ 1.24
Limch1Q3UH68 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Limch1Q3UH68 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Limch1Q3UH68 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Limch1Q3UH68 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
Limch1Q3UH68 Cdc34b-202ENSMUST00000188741 1252 ntBASIC22.8■■□□□ 1.24
Limch1Q3UH68 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Limch1Q3UH68 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Limch1Q3UH68 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Limch1Q3UH68 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.8■■□□□ 1.24
Limch1Q3UH68 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.8■■□□□ 1.24
Limch1Q3UH68 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms