Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.47■□□□□ 0.55
Khdc4Q3TCX3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Gm27405-201ENSMUST00000184201 112 ntBASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Khdc4Q3TCX3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Khdc4Q3TCX3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Khdc4Q3TCX3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Khdc4Q3TCX3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Khdc4Q3TCX3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.43■□□□□ 0.54
Khdc4Q3TCX3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Khdc4Q3TCX3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Khdc4Q3TCX3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Gm11421-201ENSMUST00000122124 294 ntBASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Gm18671-201ENSMUST00000214826 683 ntBASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.4■□□□□ 0.54
Khdc4Q3TCX3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms