Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf1Q07802 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf1Q07802 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ebf1Q07802 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf1Q07802 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.67■□□□□ 0.74
Ebf1Q07802 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ebf1Q07802 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ebf1Q07802 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Ebf1Q07802 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.67■□□□□ 0.74
Ebf1Q07802 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf1Q07802 Reep4-203ENSMUST00000226563 1444 ntBASIC19.67■□□□□ 0.74
Ebf1Q07802 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf1Q07802 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf1Q07802 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf1Q07802 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf1Q07802 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ebf1Q07802 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.65■□□□□ 0.74
Ebf1Q07802 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf1Q07802 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Ebf1Q07802 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.65■□□□□ 0.74
Ebf1Q07802 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf1Q07802 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf1Q07802 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf1Q07802 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ebf1Q07802 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ebf1Q07802 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ebf1Q07802 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf1Q07802 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ebf1Q07802 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ebf1Q07802 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf1Q07802 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ebf1Q07802 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf1Q07802 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf1Q07802 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf1Q07802 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf1Q07802 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf1Q07802 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ebf1Q07802 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ebf1Q07802 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.62■□□□□ 0.73
Ebf1Q07802 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.62■□□□□ 0.73
Ebf1Q07802 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ebf1Q07802 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf1Q07802 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf1Q07802 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.61■□□□□ 0.73
Ebf1Q07802 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf1Q07802 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ebf1Q07802 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.61■□□□□ 0.73
Ebf1Q07802 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.61■□□□□ 0.73
Ebf1Q07802 Gm7514-201ENSMUST00000209475 934 ntBASIC19.61■□□□□ 0.73
Ebf1Q07802 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf1Q07802 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf1Q07802 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf1Q07802 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf1Q07802 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ebf1Q07802 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ebf1Q07802 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ebf1Q07802 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.59■□□□□ 0.73
Ebf1Q07802 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ebf1Q07802 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ebf1Q07802 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf1Q07802 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.58■□□□□ 0.73
Ebf1Q07802 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ebf1Q07802 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms