Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.35■□□□□ 0.21
Ccl21aP84444 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccl21aP84444 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccl21aP84444 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccl21aP84444 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ccl21aP84444 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ccl21aP84444 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.35■□□□□ 0.21
Ccl21aP84444 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccl21aP84444 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccl21aP84444 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccl21aP84444 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccl21aP84444 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccl21aP84444 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccl21aP84444 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccl21aP84444 Gm715-201ENSMUST00000117865 831 ntBASIC16.34■□□□□ 0.21
Ccl21aP84444 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccl21aP84444 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Ccl21aP84444 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccl21aP84444 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccl21aP84444 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccl21aP84444 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccl21aP84444 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccl21aP84444 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccl21aP84444 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccl21aP84444 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccl21aP84444 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ccl21aP84444 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccl21aP84444 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccl21aP84444 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ccl21aP84444 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccl21aP84444 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccl21aP84444 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccl21aP84444 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccl21aP84444 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccl21aP84444 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccl21aP84444 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccl21aP84444 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ccl21aP84444 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccl21aP84444 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccl21aP84444 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccl21aP84444 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccl21aP84444 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ccl21aP84444 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccl21aP84444 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccl21aP84444 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.31■□□□□ 0.2
Ccl21aP84444 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccl21aP84444 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccl21aP84444 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccl21aP84444 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccl21aP84444 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccl21aP84444 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.31■□□□□ 0.2
Ccl21aP84444 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccl21aP84444 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccl21aP84444 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ccl21aP84444 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccl21aP84444 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Ccl21aP84444 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl21aP84444 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl21aP84444 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ccl21aP84444 Gm15565-201ENSMUST00000118890 427 ntBASIC16.3■□□□□ 0.2
Ccl21aP84444 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ccl21aP84444 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Ccl21aP84444 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.3■□□□□ 0.2
Ccl21aP84444 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ccl21aP84444 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl21aP84444 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccl21aP84444 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl21aP84444 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl21aP84444 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.29■□□□□ 0.2
Ccl21aP84444 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccl21aP84444 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.29■□□□□ 0.2
Ccl21aP84444 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl21aP84444 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccl21aP84444 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl21aP84444 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl21aP84444 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccl21aP84444 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccl21aP84444 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ccl21aP84444 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl21aP84444 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl21aP84444 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Ccl21aP84444 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.28■□□□□ 0.2
Ccl21aP84444 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl21aP84444 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl21aP84444 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccl21aP84444 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccl21aP84444 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccl21aP84444 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccl21aP84444 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccl21aP84444 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms