Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Six5P70178 Smad6-203ENSMUST00000179458 273 ntBASIC18.19■□□□□ 0.5
Six5P70178 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Six5P70178 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six5P70178 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six5P70178 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Six5P70178 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Six5P70178 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Six5P70178 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six5P70178 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.18■□□□□ 0.5
Six5P70178 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Six5P70178 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.18■□□□□ 0.5
Six5P70178 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Six5P70178 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six5P70178 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Six5P70178 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six5P70178 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Six5P70178 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Six5P70178 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six5P70178 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six5P70178 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Six5P70178 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Six5P70178 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Six5P70178 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Six5P70178 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Six5P70178 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.15■□□□□ 0.5
Six5P70178 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.15■□□□□ 0.5
Six5P70178 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Six5P70178 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Six5P70178 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.14■□□□□ 0.5
Six5P70178 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six5P70178 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six5P70178 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.14■□□□□ 0.49
Six5P70178 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six5P70178 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six5P70178 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Six5P70178 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Six5P70178 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.14■□□□□ 0.49
Six5P70178 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Six5P70178 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six5P70178 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Six5P70178 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.14■□□□□ 0.49
Six5P70178 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Six5P70178 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Six5P70178 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.13■□□□□ 0.49
Six5P70178 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Six5P70178 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.13■□□□□ 0.49
Six5P70178 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Six5P70178 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Six5P70178 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six5P70178 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six5P70178 Gm11421-201ENSMUST00000122124 294 ntBASIC18.12■□□□□ 0.49
Six5P70178 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Six5P70178 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six5P70178 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Six5P70178 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Six5P70178 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Six5P70178 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six5P70178 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Six5P70178 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six5P70178 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.1■□□□□ 0.49
Six5P70178 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six5P70178 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Six5P70178 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six5P70178 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six5P70178 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six5P70178 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six5P70178 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six5P70178 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six5P70178 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms