Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Msh6P54276 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Msh6P54276 Gm12527-201ENSMUST00000117967 564 ntBASIC24.96■■□□□ 1.59
Msh6P54276 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
Msh6P54276 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
Msh6P54276 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Msh6P54276 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Msh6P54276 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Msh6P54276 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Msh6P54276 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Msh6P54276 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
Msh6P54276 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Msh6P54276 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Msh6P54276 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Msh6P54276 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Msh6P54276 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Msh6P54276 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Msh6P54276 Gm13146-201ENSMUST00000118508 780 ntBASIC24.94■■□□□ 1.58
Msh6P54276 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Msh6P54276 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Msh6P54276 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Msh6P54276 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Msh6P54276 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Msh6P54276 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Msh6P54276 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Msh6P54276 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Msh6P54276 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Msh6P54276 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Msh6P54276 Gm13148-201ENSMUST00000118892 745 ntBASIC24.93■■□□□ 1.58
Msh6P54276 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC24.93■■□□□ 1.58
Msh6P54276 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Msh6P54276 CT030146.1-201ENSMUST00000220919 217 ntBASIC24.93■■□□□ 1.58
Msh6P54276 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Msh6P54276 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Msh6P54276 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Msh6P54276 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Msh6P54276 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Msh6P54276 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Msh6P54276 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Msh6P54276 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
Msh6P54276 Gm20760-201ENSMUST00000179197 648 ntBASIC24.92■■□□□ 1.58
Msh6P54276 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC24.92■■□□□ 1.58
Msh6P54276 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Msh6P54276 Gm42911-201ENSMUST00000199360 1630 ntBASIC24.91■■□□□ 1.58
Msh6P54276 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Msh6P54276 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Msh6P54276 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Msh6P54276 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Msh6P54276 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Msh6P54276 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Msh6P54276 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Msh6P54276 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Msh6P54276 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Msh6P54276 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Msh6P54276 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Msh6P54276 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Msh6P54276 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Msh6P54276 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Msh6P54276 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Msh6P54276 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Msh6P54276 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Msh6P54276 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Msh6P54276 AA386476-201ENSMUST00000098781 1665 ntBASIC24.88■■□□□ 1.57
Msh6P54276 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Msh6P54276 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC24.88■■□□□ 1.57
Msh6P54276 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
Msh6P54276 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Msh6P54276 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC24.87■■□□□ 1.57
Msh6P54276 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Msh6P54276 AC154266.1-201ENSMUST00000223190 503 ntBASIC24.87■■□□□ 1.57
Msh6P54276 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Msh6P54276 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Msh6P54276 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Msh6P54276 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Msh6P54276 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Msh6P54276 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Msh6P54276 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Msh6P54276 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC24.86■■□□□ 1.57
Msh6P54276 Gm22240-201ENSMUST00000175225 82 ntBASIC24.86■■□□□ 1.57
Msh6P54276 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC24.86■■□□□ 1.57
Msh6P54276 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Msh6P54276 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Msh6P54276 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Msh6P54276 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Msh6P54276 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC24.85■■□□□ 1.57
Msh6P54276 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Msh6P54276 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Msh6P54276 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Msh6P54276 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Msh6P54276 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.84■■□□□ 1.57
Msh6P54276 CT010467.1-202ENSMUST00000205406 714 ntBASIC24.84■■□□□ 1.57
Msh6P54276 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.84■■□□□ 1.57
Msh6P54276 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Msh6P54276 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Msh6P54276 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Msh6P54276 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Msh6P54276 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Msh6P54276 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.83■■□□□ 1.57
Msh6P54276 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC24.83■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms