Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Hmga2P52927 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.56■□□□□ 0.24
Hmga2P52927 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
Hmga2P52927 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Hmga2P52927 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.56■□□□□ 0.24
Hmga2P52927 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hmga2P52927 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.56■□□□□ 0.24
Hmga2P52927 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Hmga2P52927 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmga2P52927 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Hmga2P52927 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmga2P52927 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hmga2P52927 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga2P52927 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga2P52927 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmga2P52927 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga2P52927 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.54■□□□□ 0.24
Hmga2P52927 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.54■□□□□ 0.24
Hmga2P52927 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.54■□□□□ 0.24
Hmga2P52927 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga2P52927 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Hmga2P52927 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga2P52927 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga2P52927 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmga2P52927 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hmga2P52927 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.53■□□□□ 0.24
Hmga2P52927 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
Hmga2P52927 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.53■□□□□ 0.24
Hmga2P52927 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.53■□□□□ 0.24
Hmga2P52927 Gm40881-201ENSMUST00000223397 166 ntBASIC16.53■□□□□ 0.24
Hmga2P52927 Gm9870-201ENSMUST00000063874 645 ntBASIC16.53■□□□□ 0.24
Hmga2P52927 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hmga2P52927 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.53■□□□□ 0.24
Hmga2P52927 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hmga2P52927 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmga2P52927 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.52■□□□□ 0.24
Hmga2P52927 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga2P52927 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Hmga2P52927 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga2P52927 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga2P52927 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.52■□□□□ 0.24
Hmga2P52927 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga2P52927 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga2P52927 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.52■□□□□ 0.24
Hmga2P52927 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga2P52927 Gm5921-201ENSMUST00000075898 882 ntBASIC16.52■□□□□ 0.24
Hmga2P52927 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga2P52927 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmga2P52927 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hmga2P52927 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Hmga2P52927 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga2P52927 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga2P52927 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga2P52927 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga2P52927 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga2P52927 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga2P52927 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga2P52927 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmga2P52927 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmga2P52927 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmga2P52927 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmga2P52927 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Hmga2P52927 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Hmga2P52927 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmga2P52927 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmga2P52927 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.5■□□□□ 0.23
Hmga2P52927 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.5■□□□□ 0.23
Hmga2P52927 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms