Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RoraP51448 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RoraP51448 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.37■□□□□ 0.53
RoraP51448 Gm42778-201ENSMUST00000199644 553 ntBASIC18.37■□□□□ 0.53
RoraP51448 AV356131-201ENSMUST00000206201 750 ntBASIC18.37■□□□□ 0.53
RoraP51448 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RoraP51448 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.37■□□□□ 0.53
RoraP51448 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RoraP51448 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RoraP51448 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 Gm29257-201ENSMUST00000186115 639 ntBASIC18.36■□□□□ 0.53
RoraP51448 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.36■□□□□ 0.53
RoraP51448 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.36■□□□□ 0.53
RoraP51448 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
RoraP51448 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RoraP51448 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RoraP51448 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RoraP51448 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RoraP51448 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RoraP51448 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RoraP51448 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RoraP51448 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
RoraP51448 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.35■□□□□ 0.53
RoraP51448 Gm37179-201ENSMUST00000194862 823 ntBASIC18.35■□□□□ 0.53
RoraP51448 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.35■□□□□ 0.53
RoraP51448 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.35■□□□□ 0.53
RoraP51448 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RoraP51448 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RoraP51448 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RoraP51448 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RoraP51448 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RoraP51448 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RoraP51448 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
RoraP51448 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RoraP51448 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.34■□□□□ 0.53
RoraP51448 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RoraP51448 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RoraP51448 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RoraP51448 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RoraP51448 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.33■□□□□ 0.52
RoraP51448 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Gm9988-201ENSMUST00000069786 435 ntBASIC18.33■□□□□ 0.52
RoraP51448 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.33■□□□□ 0.52
RoraP51448 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RoraP51448 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.32■□□□□ 0.52
RoraP51448 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.32■□□□□ 0.52
RoraP51448 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RoraP51448 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.31■□□□□ 0.52
RoraP51448 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RoraP51448 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.31■□□□□ 0.52
RoraP51448 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RoraP51448 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RoraP51448 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RoraP51448 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.3■□□□□ 0.52
RoraP51448 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RoraP51448 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RoraP51448 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RoraP51448 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.3■□□□□ 0.52
RoraP51448 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RoraP51448 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RoraP51448 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.3■□□□□ 0.52
RoraP51448 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RoraP51448 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RoraP51448 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms