Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx3P50481 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.83■□□□□ 0.77
Lhx3P50481 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx3P50481 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lhx3P50481 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lhx3P50481 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.82■□□□□ 0.76
Lhx3P50481 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx3P50481 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Lhx3P50481 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.82■□□□□ 0.76
Lhx3P50481 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx3P50481 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lhx3P50481 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx3P50481 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.81■□□□□ 0.76
Lhx3P50481 Gm5874-201ENSMUST00000096101 508 ntBASIC19.81■□□□□ 0.76
Lhx3P50481 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx3P50481 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx3P50481 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx3P50481 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx3P50481 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx3P50481 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx3P50481 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.8■□□□□ 0.76
Lhx3P50481 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
Lhx3P50481 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx3P50481 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx3P50481 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx3P50481 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx3P50481 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx3P50481 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx3P50481 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx3P50481 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Lhx3P50481 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx3P50481 Gm8495-201ENSMUST00000188740 694 ntBASIC19.79■□□□□ 0.76
Lhx3P50481 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.79■□□□□ 0.76
Lhx3P50481 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx3P50481 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx3P50481 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx3P50481 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx3P50481 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.78■□□□□ 0.76
Lhx3P50481 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.78■□□□□ 0.76
Lhx3P50481 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.78■□□□□ 0.76
Lhx3P50481 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.78■□□□□ 0.76
Lhx3P50481 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx3P50481 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx3P50481 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Lhx3P50481 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx3P50481 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx3P50481 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Lhx3P50481 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.77■□□□□ 0.76
Lhx3P50481 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx3P50481 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx3P50481 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx3P50481 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx3P50481 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx3P50481 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx3P50481 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lhx3P50481 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.76■□□□□ 0.75
Lhx3P50481 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx3P50481 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx3P50481 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx3P50481 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx3P50481 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx3P50481 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx3P50481 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.75■□□□□ 0.75
Lhx3P50481 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Lhx3P50481 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx3P50481 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lhx3P50481 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx3P50481 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Lhx3P50481 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx3P50481 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx3P50481 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx3P50481 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.74■□□□□ 0.75
Lhx3P50481 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.74■□□□□ 0.75
Lhx3P50481 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx3P50481 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.74■□□□□ 0.75
Lhx3P50481 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx3P50481 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx3P50481 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Lhx3P50481 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx3P50481 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lhx3P50481 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms