Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Irf8P23611 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Irf8P23611 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Irf8P23611 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Irf8P23611 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Irf8P23611 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.07■□□□□ 0.96
Irf8P23611 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf8P23611 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Irf8P23611 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.06■□□□□ 0.96
Irf8P23611 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.06■□□□□ 0.96
Irf8P23611 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf8P23611 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf8P23611 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Irf8P23611 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf8P23611 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf8P23611 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Irf8P23611 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf8P23611 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.05■□□□□ 0.96
Irf8P23611 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.05■□□□□ 0.96
Irf8P23611 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.05■□□□□ 0.96
Irf8P23611 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf8P23611 Gm27801-201ENSMUST00000184174 223 ntBASIC21.05■□□□□ 0.96
Irf8P23611 Gm43060-201ENSMUST00000200621 289 ntBASIC21.05■□□□□ 0.96
Irf8P23611 Gm40848-201ENSMUST00000221998 324 ntBASIC21.05■□□□□ 0.96
Irf8P23611 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf8P23611 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Irf8P23611 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Irf8P23611 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.05■□□□□ 0.96
Irf8P23611 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf8P23611 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Irf8P23611 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Irf8P23611 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Irf8P23611 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf8P23611 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Irf8P23611 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.03■□□□□ 0.96
Irf8P23611 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Irf8P23611 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Irf8P23611 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Irf8P23611 Notumos-201ENSMUST00000151998 2659 ntBASIC21.02■□□□□ 0.96
Irf8P23611 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf8P23611 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf8P23611 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Irf8P23611 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.02■□□□□ 0.96
Irf8P23611 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf8P23611 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Irf8P23611 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf8P23611 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Irf8P23611 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Irf8P23611 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Irf8P23611 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.01■□□□□ 0.95
Irf8P23611 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.01■□□□□ 0.95
Irf8P23611 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.01■□□□□ 0.95
Irf8P23611 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Irf8P23611 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21■□□□□ 0.95
Irf8P23611 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf8P23611 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf8P23611 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf8P23611 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Irf8P23611 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21■□□□□ 0.95
Irf8P23611 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Irf8P23611 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Irf8P23611 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf8P23611 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf8P23611 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21■□□□□ 0.95
Irf8P23611 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Irf8P23611 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf8P23611 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Irf8P23611 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Irf8P23611 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf8P23611 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf8P23611 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Irf8P23611 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Irf8P23611 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Irf8P23611 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms