Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.68■□□□□ 0.58
Cntn1P12960 Gm42642-201ENSMUST00000200683 355 ntBASIC18.68■□□□□ 0.58
Cntn1P12960 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntn1P12960 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntn1P12960 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cntn1P12960 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.67■□□□□ 0.58
Cntn1P12960 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.67■□□□□ 0.58
Cntn1P12960 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.67■□□□□ 0.58
Cntn1P12960 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cntn1P12960 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.67■□□□□ 0.58
Cntn1P12960 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.67■□□□□ 0.58
Cntn1P12960 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cntn1P12960 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cntn1P12960 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntn1P12960 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntn1P12960 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.66■□□□□ 0.58
Cntn1P12960 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntn1P12960 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntn1P12960 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cntn1P12960 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.66■□□□□ 0.58
Cntn1P12960 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntn1P12960 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntn1P12960 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Cntn1P12960 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.65■□□□□ 0.58
Cntn1P12960 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Cntn1P12960 Gm26571-201ENSMUST00000181399 666 ntBASIC18.65■□□□□ 0.58
Cntn1P12960 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntn1P12960 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cntn1P12960 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.65■□□□□ 0.58
Cntn1P12960 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Cntn1P12960 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cntn1P12960 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Cntn1P12960 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntn1P12960 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntn1P12960 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntn1P12960 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.64■□□□□ 0.57
Cntn1P12960 Gm27801-201ENSMUST00000184174 223 ntBASIC18.64■□□□□ 0.57
Cntn1P12960 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cntn1P12960 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntn1P12960 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntn1P12960 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntn1P12960 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.64■□□□□ 0.57
Cntn1P12960 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cntn1P12960 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cntn1P12960 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cntn1P12960 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cntn1P12960 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntn1P12960 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cntn1P12960 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntn1P12960 Gm9988-201ENSMUST00000069786 435 ntBASIC18.62■□□□□ 0.57
Cntn1P12960 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cntn1P12960 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cntn1P12960 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.62■□□□□ 0.57
Cntn1P12960 AA386476-201ENSMUST00000098781 1665 ntBASIC18.62■□□□□ 0.57
Cntn1P12960 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cntn1P12960 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cntn1P12960 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cntn1P12960 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.61■□□□□ 0.57
Cntn1P12960 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cntn1P12960 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.61■□□□□ 0.57
Cntn1P12960 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cntn1P12960 Gm42778-201ENSMUST00000199644 553 ntBASIC18.61■□□□□ 0.57
Cntn1P12960 Gm42569-201ENSMUST00000200539 472 ntBASIC18.61■□□□□ 0.57
Cntn1P12960 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cntn1P12960 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cntn1P12960 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cntn1P12960 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.6■□□□□ 0.57
Cntn1P12960 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cntn1P12960 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cntn1P12960 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cntn1P12960 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cntn1P12960 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.6■□□□□ 0.57
Cntn1P12960 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.6■□□□□ 0.57
Cntn1P12960 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cntn1P12960 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.6■□□□□ 0.57
Cntn1P12960 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cntn1P12960 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cntn1P12960 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cntn1P12960 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cntn1P12960 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms