Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PtcraP0C6B2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PtcraP0C6B2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PtcraP0C6B2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PtcraP0C6B2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PtcraP0C6B2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PtcraP0C6B2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Gm11421-201ENSMUST00000122124 294 ntBASIC16.9■□□□□ 0.3
PtcraP0C6B2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PtcraP0C6B2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PtcraP0C6B2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PtcraP0C6B2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PtcraP0C6B2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PtcraP0C6B2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PtcraP0C6B2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.87■□□□□ 0.29
PtcraP0C6B2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PtcraP0C6B2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
PtcraP0C6B2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PtcraP0C6B2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PtcraP0C6B2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PtcraP0C6B2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.86■□□□□ 0.29
PtcraP0C6B2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
PtcraP0C6B2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PtcraP0C6B2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PtcraP0C6B2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
PtcraP0C6B2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PtcraP0C6B2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PtcraP0C6B2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PtcraP0C6B2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PtcraP0C6B2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PtcraP0C6B2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Gm26833-201ENSMUST00000180899 440 ntBASIC16.85■□□□□ 0.29
PtcraP0C6B2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PtcraP0C6B2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PtcraP0C6B2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PtcraP0C6B2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PtcraP0C6B2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PtcraP0C6B2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PtcraP0C6B2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PtcraP0C6B2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.83■□□□□ 0.28
PtcraP0C6B2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PtcraP0C6B2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PtcraP0C6B2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Gm27801-201ENSMUST00000184174 223 ntBASIC16.82■□□□□ 0.28
PtcraP0C6B2 Gm43017-201ENSMUST00000198296 752 ntBASIC16.82■□□□□ 0.28
PtcraP0C6B2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PtcraP0C6B2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms