Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sod1P08228 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sod1P08228 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Sod1P08228 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sod1P08228 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sod1P08228 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.5■□□□□ 0.55
Sod1P08228 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sod1P08228 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sod1P08228 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sod1P08228 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sod1P08228 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sod1P08228 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sod1P08228 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sod1P08228 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Sod1P08228 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Sod1P08228 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.48■□□□□ 0.55
Sod1P08228 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sod1P08228 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sod1P08228 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sod1P08228 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.48■□□□□ 0.55
Sod1P08228 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.48■□□□□ 0.55
Sod1P08228 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sod1P08228 Gm6211-202ENSMUST00000167849 925 ntBASIC18.47■□□□□ 0.55
Sod1P08228 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Sod1P08228 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sod1P08228 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sod1P08228 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Sod1P08228 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sod1P08228 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sod1P08228 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.46■□□□□ 0.55
Sod1P08228 Gm5408-201ENSMUST00000197998 747 ntBASIC18.46■□□□□ 0.55
Sod1P08228 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sod1P08228 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sod1P08228 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.46■□□□□ 0.55
Sod1P08228 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sod1P08228 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.46■□□□□ 0.55
Sod1P08228 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sod1P08228 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sod1P08228 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Sod1P08228 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sod1P08228 Gm7860-201ENSMUST00000121190 879 ntBASIC18.45■□□□□ 0.54
Sod1P08228 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sod1P08228 Gm20760-201ENSMUST00000179197 648 ntBASIC18.45■□□□□ 0.54
Sod1P08228 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.45■□□□□ 0.54
Sod1P08228 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sod1P08228 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sod1P08228 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.45■□□□□ 0.54
Sod1P08228 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sod1P08228 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Sod1P08228 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sod1P08228 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sod1P08228 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sod1P08228 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sod1P08228 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sod1P08228 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Sod1P08228 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sod1P08228 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Sod1P08228 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.43■□□□□ 0.54
Sod1P08228 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Sod1P08228 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sod1P08228 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sod1P08228 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.42■□□□□ 0.54
Sod1P08228 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.42■□□□□ 0.54
Sod1P08228 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sod1P08228 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.42■□□□□ 0.54
Sod1P08228 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sod1P08228 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.41■□□□□ 0.54
Sod1P08228 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.41■□□□□ 0.54
Sod1P08228 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sod1P08228 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.41■□□□□ 0.54
Sod1P08228 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sod1P08228 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sod1P08228 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sod1P08228 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Sod1P08228 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sod1P08228 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sod1P08228 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sod1P08228 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.4■□□□□ 0.54
Sod1P08228 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.4■□□□□ 0.54
Sod1P08228 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.4■□□□□ 0.54
Sod1P08228 Gm20049-201ENSMUST00000219950 730 ntBASIC18.4■□□□□ 0.54
Sod1P08228 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms