Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
P06344 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P06344 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06344 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P06344 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06344 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
P06344 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06344 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.36■□□□□ 0.37
P06344 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
P06344 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.36■□□□□ 0.37
P06344 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P06344 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
P06344 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
P06344 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.35■□□□□ 0.37
P06344 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.35■□□□□ 0.37
P06344 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.35■□□□□ 0.37
P06344 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.35■□□□□ 0.37
P06344 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
P06344 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
P06344 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P06344 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P06344 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P06344 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P06344 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P06344 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P06344 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.34■□□□□ 0.37
P06344 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
P06344 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P06344 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P06344 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
P06344 Gm5874-201ENSMUST00000096101 508 ntBASIC17.34■□□□□ 0.37
P06344 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
P06344 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
P06344 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P06344 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P06344 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
P06344 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
P06344 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P06344 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
P06344 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P06344 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.32■□□□□ 0.36
P06344 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P06344 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.32■□□□□ 0.36
P06344 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P06344 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P06344 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P06344 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P06344 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.32■□□□□ 0.36
P06344 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.32■□□□□ 0.36
P06344 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
P06344 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P06344 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P06344 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
P06344 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.32■□□□□ 0.36
P06344 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
P06344 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P06344 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
P06344 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P06344 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.31■□□□□ 0.36
P06344 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
P06344 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.31■□□□□ 0.36
P06344 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.31■□□□□ 0.36
P06344 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
P06344 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
P06344 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P06344 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P06344 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.3■□□□□ 0.36
P06344 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.3■□□□□ 0.36
P06344 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P06344 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
P06344 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
P06344 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
P06344 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P06344 Gm10493-201ENSMUST00000097270 612 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms