Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Gm8495-201ENSMUST00000188740 694 ntBASIC21.23■□□□□ 0.99
P01734 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P01734 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P01734 Gm5874-201ENSMUST00000096101 508 ntBASIC21.23■□□□□ 0.99
P01734 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P01734 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
P01734 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.23■□□□□ 0.99
P01734 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.22■□□□□ 0.99
P01734 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01734 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
P01734 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
P01734 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.21■□□□□ 0.99
P01734 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
P01734 Gm27801-201ENSMUST00000184174 223 ntBASIC21.21■□□□□ 0.99
P01734 Gm10493-201ENSMUST00000097270 612 ntBASIC21.21■□□□□ 0.99
P01734 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
P01734 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01734 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
P01734 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01734 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01734 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01734 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.2■□□□□ 0.98
P01734 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.2■□□□□ 0.98
P01734 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01734 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01734 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.2■□□□□ 0.98
P01734 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01734 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
P01734 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P01734 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
P01734 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
P01734 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.19■□□□□ 0.98
P01734 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P01734 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P01734 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P01734 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
P01734 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.18■□□□□ 0.98
P01734 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01734 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
P01734 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01734 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01734 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01734 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01734 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.17■□□□□ 0.98
P01734 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
P01734 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.17■□□□□ 0.98
P01734 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01734 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01734 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01734 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
P01734 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.17■□□□□ 0.98
P01734 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
P01734 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
P01734 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.17■□□□□ 0.98
P01734 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.16■□□□□ 0.98
P01734 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
P01734 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.16■□□□□ 0.98
P01734 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.16■□□□□ 0.98
P01734 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.16■□□□□ 0.98
P01734 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
P01734 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
P01734 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
P01734 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
P01734 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
P01734 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P01734 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P01734 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
P01734 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
P01734 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
P01734 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
P01734 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
P01734 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.13■□□□□ 0.97
P01734 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P01734 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms