Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim1O70400 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim1O70400 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim1O70400 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim1O70400 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pdlim1O70400 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim1O70400 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.25■□□□□ 0.67
Pdlim1O70400 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.25■□□□□ 0.67
Pdlim1O70400 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.25■□□□□ 0.67
Pdlim1O70400 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pdlim1O70400 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.25■□□□□ 0.67
Pdlim1O70400 Gm40848-201ENSMUST00000221998 324 ntBASIC19.25■□□□□ 0.67
Pdlim1O70400 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pdlim1O70400 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pdlim1O70400 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pdlim1O70400 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim1O70400 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim1O70400 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim1O70400 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Pdlim1O70400 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pdlim1O70400 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim1O70400 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim1O70400 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.24■□□□□ 0.67
Pdlim1O70400 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.24■□□□□ 0.67
Pdlim1O70400 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pdlim1O70400 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim1O70400 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim1O70400 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pdlim1O70400 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim1O70400 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim1O70400 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.23■□□□□ 0.67
Pdlim1O70400 Gm27801-201ENSMUST00000184174 223 ntBASIC19.23■□□□□ 0.67
Pdlim1O70400 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim1O70400 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim1O70400 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pdlim1O70400 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim1O70400 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim1O70400 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim1O70400 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pdlim1O70400 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim1O70400 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Pdlim1O70400 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim1O70400 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pdlim1O70400 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim1O70400 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim1O70400 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim1O70400 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pdlim1O70400 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.21■□□□□ 0.67
Pdlim1O70400 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim1O70400 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pdlim1O70400 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pdlim1O70400 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim1O70400 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim1O70400 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim1O70400 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Pdlim1O70400 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Pdlim1O70400 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim1O70400 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pdlim1O70400 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.2■□□□□ 0.66
Pdlim1O70400 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim1O70400 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pdlim1O70400 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.19■□□□□ 0.66
Pdlim1O70400 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim1O70400 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim1O70400 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim1O70400 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim1O70400 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pdlim1O70400 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pdlim1O70400 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pdlim1O70400 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pdlim1O70400 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim1O70400 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim1O70400 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim1O70400 Gm15039-201ENSMUST00000118914 875 ntBASIC19.18■□□□□ 0.66
Pdlim1O70400 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Pdlim1O70400 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.18■□□□□ 0.66
Pdlim1O70400 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim1O70400 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim1O70400 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Pdlim1O70400 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim1O70400 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim1O70400 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim1O70400 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.18■□□□□ 0.66
Pdlim1O70400 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim1O70400 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim1O70400 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim1O70400 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim1O70400 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.17■□□□□ 0.66
Pdlim1O70400 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pdlim1O70400 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.17■□□□□ 0.66
Pdlim1O70400 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim1O70400 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim1O70400 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim1O70400 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim1O70400 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.16■□□□□ 0.66
Pdlim1O70400 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim1O70400 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim1O70400 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim1O70400 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pdlim1O70400 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms