Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.31■□□□□ 0.36
SgceO70258 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SgceO70258 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SgceO70258 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SgceO70258 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SgceO70258 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.29■□□□□ 0.36
SgceO70258 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SgceO70258 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SgceO70258 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SgceO70258 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.28■□□□□ 0.36
SgceO70258 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.28■□□□□ 0.36
SgceO70258 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.28■□□□□ 0.36
SgceO70258 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.28■□□□□ 0.36
SgceO70258 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SgceO70258 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SgceO70258 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgceO70258 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgceO70258 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgceO70258 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgceO70258 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgceO70258 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SgceO70258 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SgceO70258 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SgceO70258 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SgceO70258 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SgceO70258 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SgceO70258 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SgceO70258 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SgceO70258 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.26■□□□□ 0.35
SgceO70258 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.26■□□□□ 0.35
SgceO70258 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SgceO70258 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.26■□□□□ 0.35
SgceO70258 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.26■□□□□ 0.35
SgceO70258 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SgceO70258 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SgceO70258 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SgceO70258 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SgceO70258 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SgceO70258 Gm21956-201ENSMUST00000179946 522 ntBASIC17.25■□□□□ 0.35
SgceO70258 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.25■□□□□ 0.35
SgceO70258 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SgceO70258 Gm43137-201ENSMUST00000198052 594 ntBASIC17.25■□□□□ 0.35
SgceO70258 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SgceO70258 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgceO70258 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgceO70258 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgceO70258 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SgceO70258 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.24■□□□□ 0.35
SgceO70258 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SgceO70258 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SgceO70258 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SgceO70258 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms