Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.25■□□□□ 0.83
Per2O54943 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Per2O54943 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Per2O54943 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Per2O54943 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Per2O54943 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.24■□□□□ 0.83
Per2O54943 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Per2O54943 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Per2O54943 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Per2O54943 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.24■□□□□ 0.83
Per2O54943 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Per2O54943 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.24■□□□□ 0.83
Per2O54943 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Per2O54943 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Per2O54943 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per2O54943 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per2O54943 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Per2O54943 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Per2O54943 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Per2O54943 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.23■□□□□ 0.83
Per2O54943 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Per2O54943 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Per2O54943 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Per2O54943 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.22■□□□□ 0.83
Per2O54943 Gm43137-201ENSMUST00000198052 594 ntBASIC20.22■□□□□ 0.83
Per2O54943 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.22■□□□□ 0.83
Per2O54943 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Per2O54943 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Per2O54943 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Per2O54943 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Per2O54943 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Per2O54943 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.21■□□□□ 0.83
Per2O54943 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.21■□□□□ 0.83
Per2O54943 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Per2O54943 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Per2O54943 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.21■□□□□ 0.83
Per2O54943 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Per2O54943 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.21■□□□□ 0.83
Per2O54943 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Per2O54943 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.2■□□□□ 0.82
Per2O54943 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.2■□□□□ 0.82
Per2O54943 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.2■□□□□ 0.82
Per2O54943 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.2■□□□□ 0.82
Per2O54943 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.2■□□□□ 0.82
Per2O54943 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Per2O54943 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Per2O54943 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Per2O54943 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Per2O54943 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Per2O54943 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Per2O54943 Gm21956-201ENSMUST00000179946 522 ntBASIC20.19■□□□□ 0.82
Per2O54943 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.19■□□□□ 0.82
Per2O54943 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Per2O54943 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Per2O54943 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Per2O54943 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Per2O54943 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Per2O54943 Spcs1-204ENSMUST00000226782 949 ntBASIC20.18■□□□□ 0.82
Per2O54943 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Per2O54943 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Per2O54943 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Per2O54943 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.17■□□□□ 0.82
Per2O54943 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Per2O54943 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Per2O54943 Iqck-206ENSMUST00000208658 2891 ntBASIC20.17■□□□□ 0.82
Per2O54943 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Per2O54943 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Per2O54943 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Per2O54943 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.16■□□□□ 0.82
Per2O54943 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Per2O54943 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Per2O54943 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Per2O54943 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Per2O54943 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.16■□□□□ 0.82
Per2O54943 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.16■□□□□ 0.82
Per2O54943 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Per2O54943 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Per2O54943 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Per2O54943 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Per2O54943 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Per2O54943 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Per2O54943 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Per2O54943 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms