Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.35■□□□□ 0.37
Alx4O35137 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.35■□□□□ 0.37
Alx4O35137 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.35■□□□□ 0.37
Alx4O35137 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Alx4O35137 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 BC021767-201ENSMUST00000126387 1716 ntBASIC17.35■□□□□ 0.37
Alx4O35137 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Alx4O35137 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Alx4O35137 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx4O35137 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Alx4O35137 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Alx4O35137 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx4O35137 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx4O35137 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Alx4O35137 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx4O35137 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.34■□□□□ 0.37
Alx4O35137 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.34■□□□□ 0.37
Alx4O35137 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx4O35137 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Alx4O35137 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alx4O35137 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Alx4O35137 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.33■□□□□ 0.37
Alx4O35137 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.33■□□□□ 0.36
Alx4O35137 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Alx4O35137 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Alx4O35137 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Alx4O35137 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx4O35137 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx4O35137 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Alx4O35137 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Alx4O35137 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx4O35137 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.32■□□□□ 0.36
Alx4O35137 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx4O35137 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Alx4O35137 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Alx4O35137 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Alx4O35137 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Alx4O35137 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Alx4O35137 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Alx4O35137 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx4O35137 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx4O35137 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Alx4O35137 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.29■□□□□ 0.36
Alx4O35137 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx4O35137 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx4O35137 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx4O35137 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
Alx4O35137 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.29■□□□□ 0.36
Alx4O35137 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.29■□□□□ 0.36
Alx4O35137 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Alx4O35137 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.29■□□□□ 0.36
Alx4O35137 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx4O35137 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Alx4O35137 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Alx4O35137 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.28■□□□□ 0.36
Alx4O35137 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx4O35137 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.28■□□□□ 0.36
Alx4O35137 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx4O35137 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.28■□□□□ 0.36
Alx4O35137 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Alx4O35137 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Alx4O35137 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx4O35137 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Alx4O35137 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Alx4O35137 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms