Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.81■□□□□ 0.92
Usp35M0QWN7 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.81■□□□□ 0.92
Usp35M0QWN7 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.81■□□□□ 0.92
Usp35M0QWN7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp35M0QWN7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.81■□□□□ 0.92
Usp35M0QWN7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.81■□□□□ 0.92
Usp35M0QWN7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp35M0QWN7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.8■□□□□ 0.92
Usp35M0QWN7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp35M0QWN7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.79■□□□□ 0.92
Usp35M0QWN7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.79■□□□□ 0.92
Usp35M0QWN7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Usp35M0QWN7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp35M0QWN7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp35M0QWN7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp35M0QWN7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp35M0QWN7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp35M0QWN7 Gm7291-201ENSMUST00000199147 382 ntBASIC20.78■□□□□ 0.92
Usp35M0QWN7 Gm42642-201ENSMUST00000200683 355 ntBASIC20.78■□□□□ 0.92
Usp35M0QWN7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Usp35M0QWN7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp35M0QWN7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp35M0QWN7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp35M0QWN7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp35M0QWN7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp35M0QWN7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp35M0QWN7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp35M0QWN7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp35M0QWN7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp35M0QWN7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Usp35M0QWN7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp35M0QWN7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp35M0QWN7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp35M0QWN7 Gm26571-201ENSMUST00000181399 666 ntBASIC20.76■□□□□ 0.91
Usp35M0QWN7 Mir6236-201ENSMUST00000184437 123 ntBASIC20.76■□□□□ 0.91
Usp35M0QWN7 Gm42569-201ENSMUST00000200539 472 ntBASIC20.76■□□□□ 0.91
Usp35M0QWN7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp35M0QWN7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp35M0QWN7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp35M0QWN7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp35M0QWN7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp35M0QWN7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.75■□□□□ 0.91
Usp35M0QWN7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Gm11421-201ENSMUST00000122124 294 ntBASIC20.75■□□□□ 0.91
Usp35M0QWN7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp35M0QWN7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp35M0QWN7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp35M0QWN7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp35M0QWN7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp35M0QWN7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp35M0QWN7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp35M0QWN7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Usp35M0QWN7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp35M0QWN7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp35M0QWN7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp35M0QWN7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp35M0QWN7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp35M0QWN7 Gm27405-201ENSMUST00000184201 112 ntBASIC20.73■□□□□ 0.91
Usp35M0QWN7 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.73■□□□□ 0.91
Usp35M0QWN7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.73■□□□□ 0.91
Usp35M0QWN7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp35M0QWN7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms