Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Top6blJ3QMY9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Top6blJ3QMY9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Top6blJ3QMY9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Top6blJ3QMY9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Top6blJ3QMY9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.46■□□□□ 0.87
Top6blJ3QMY9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Top6blJ3QMY9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Top6blJ3QMY9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.44■□□□□ 0.86
Top6blJ3QMY9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Top6blJ3QMY9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Top6blJ3QMY9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Gm18284-201ENSMUST00000172604 624 ntBASIC20.42■□□□□ 0.86
Top6blJ3QMY9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Top6blJ3QMY9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Gm10493-201ENSMUST00000097270 612 ntBASIC20.41■□□□□ 0.86
Top6blJ3QMY9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Top6blJ3QMY9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Top6blJ3QMY9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Top6blJ3QMY9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Top6blJ3QMY9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Top6blJ3QMY9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.4■□□□□ 0.86
Top6blJ3QMY9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Top6blJ3QMY9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Top6blJ3QMY9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Top6blJ3QMY9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Top6blJ3QMY9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Top6blJ3QMY9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Top6blJ3QMY9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Top6blJ3QMY9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Top6blJ3QMY9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Top6blJ3QMY9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.39■□□□□ 0.85
Top6blJ3QMY9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.39■□□□□ 0.85
Top6blJ3QMY9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Top6blJ3QMY9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Top6blJ3QMY9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Top6blJ3QMY9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Top6blJ3QMY9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Top6blJ3QMY9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Top6blJ3QMY9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Top6blJ3QMY9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms