Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3336J3QMQ6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3336J3QMQ6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3336J3QMQ6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3336J3QMQ6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3336J3QMQ6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3336J3QMQ6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Gm3336J3QMQ6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Gm27801-201ENSMUST00000184174 223 ntBASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3336J3QMQ6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3336J3QMQ6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3336J3QMQ6 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.09■□□□□ 0.81
Gm3336J3QMQ6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Gm3336J3QMQ6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3336J3QMQ6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3336J3QMQ6 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.09■□□□□ 0.81
Gm3336J3QMQ6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3336J3QMQ6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3336J3QMQ6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3336J3QMQ6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.08■□□□□ 0.81
Gm3336J3QMQ6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.08■□□□□ 0.81
Gm3336J3QMQ6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.08■□□□□ 0.81
Gm3336J3QMQ6 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3336J3QMQ6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3336J3QMQ6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3336J3QMQ6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.08■□□□□ 0.8
Gm3336J3QMQ6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3336J3QMQ6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 Gm5874-201ENSMUST00000096101 508 ntBASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 Gm10493-201ENSMUST00000097270 612 ntBASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3336J3QMQ6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Gm3336J3QMQ6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3336J3QMQ6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3336J3QMQ6 Gm8495-201ENSMUST00000188740 694 ntBASIC20.03■□□□□ 0.8
Gm3336J3QMQ6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3336J3QMQ6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3336J3QMQ6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3336J3QMQ6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3336J3QMQ6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.02■□□□□ 0.8
Gm3336J3QMQ6 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.02■□□□□ 0.8
Gm3336J3QMQ6 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms