Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3543D3Z235 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm3543D3Z235 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Iqck-206ENSMUST00000208658 2891 ntBASIC17.54■□□□□ 0.4
Gm3543D3Z235 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.54■□□□□ 0.4
Gm3543D3Z235 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3543D3Z235 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Gm3543D3Z235 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm3543D3Z235 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Gm3543D3Z235 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3543D3Z235 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3543D3Z235 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3543D3Z235 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3543D3Z235 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3543D3Z235 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.52■□□□□ 0.4
Gm3543D3Z235 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3543D3Z235 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm3543D3Z235 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3543D3Z235 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm3543D3Z235 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3543D3Z235 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm3543D3Z235 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.5■□□□□ 0.39
Gm3543D3Z235 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm3543D3Z235 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.5■□□□□ 0.39
Gm3543D3Z235 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Gm3543D3Z235 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm3543D3Z235 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3543D3Z235 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3543D3Z235 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3543D3Z235 Gm18284-201ENSMUST00000172604 624 ntBASIC17.48■□□□□ 0.39
Gm3543D3Z235 Gm43060-201ENSMUST00000200621 289 ntBASIC17.48■□□□□ 0.39
Gm3543D3Z235 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3543D3Z235 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3543D3Z235 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3543D3Z235 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.48■□□□□ 0.39
Gm3543D3Z235 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm3543D3Z235 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms